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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_61176321_61178806_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

61176321 - 61178806

Intron Length:

2486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTGAAAACTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGAAA

U12 Branch Point Sequence:

TTTGTTTGAAAA

Flanking Amino Acid:

QFRAAGVGSVGDQTGDENIT

Intron Amino Acid Position:

466

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

83.3

29.1

Major BPS

65.4

0.38

1.4

75.9

36.3

Major PPT

54.6

0.1

1.1

46.7

44.2

Minor 5ss

-0.6

3.2

62.3

43.4

Minor BPS

54.6

0.14

1.6

68.73

37.7

Associated Gene:

Gene:

MCC

Ensembl Gene ID:

ENSAPLG00000013663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029941

61150623 - 61342658

192036

ENSAPLT00000024224

61147186 - 61245910

98725

ENSAPLT00000014280

61150623 - 61220512

69890

ENSAPLT00000046090

61147186 - 61298770

151585

ENSAPLT00000030257

61150623 - 61323860

173238