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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_61178908_61180540_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61178908 - 61180540

Intron Length:

1633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTACC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TTTTCCTCATTT

Flanking Amino Acid:

ATALRLALQYSEQCIEAYEL

Intron Amino Acid Position:

432

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

80.6

31.9

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

90.4

0.91

0.6

88.5

Minor 5ss

43.1

-0.8

2.4

55.1

42.2

Minor BPS

68.1

0.65

1.8

88.32

37.1

Associated Gene:

Gene:

MCC

Ensembl Gene ID:

ENSAPLG00000013663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029941

61150623 - 61342658

192036

ENSAPLT00000024224

61147186 - 61245910

98725

ENSAPLT00000014280

61150623 - 61220512

69890

ENSAPLT00000046090

61147186 - 61298770

151585

ENSAPLT00000030257

61150623 - 61323860

173238