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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_61182621_61183290_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61182621 - 61183290

Intron Length:

670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGACC

5'SS Class:

strong_major

3'SS Sequence:

CTACTCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

AATCTATTAACT

Flanking Amino Acid:

VLGSEISSIGVSSTVAEHLA

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

70.9

37.8

Major BPS

81.9

0.79

0.8

81.9

Major PPT

0.54

68.9

36.8

Minor 5ss

33.1

-1.9

3.1

36.3

40.5

Minor BPS

63.8

0.51

1.6

78.51

36.7

Associated Gene:

Gene:

MCC

Ensembl Gene ID:

ENSAPLG00000013663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029941

61150623 - 61342658

192036

ENSAPLT00000024224

61147186 - 61245910

98725

ENSAPLT00000014280

61150623 - 61220512

69890

ENSAPLT00000046090

61147186 - 61298770

151585