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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_61194105_61199133_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61194105 - 61199133

Intron Length:

5029

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAGTA

5'SS Class:

major

3'SS Sequence:

CTATTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TTCTCTTTTATG

Flanking Amino Acid:

ASEHCDLAIKTVEEIEGVLG

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.1

75.2

35.1

Major BPS

84.6

0.86

41.2

Major PPT

88.5

0.86

0.7

84.2

30.5

Minor 5ss

39.6

-1.2

3.5

48.2

Minor BPS

61.5

0.22

1.7

66.67

41.7

Associated Gene:

Gene:

MCC

Ensembl Gene ID:

ENSAPLG00000013663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029941

61150623 - 61342658

192036

ENSAPLT00000024224

61147186 - 61245910

98725

ENSAPLT00000014280

61150623 - 61220512

69890

ENSAPLT00000046090

61147186 - 61298770

151585

ENSAPLT00000030257

61150623 - 61323860

173238