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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_61199298_61202773_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61199298 - 61202773

Intron Length:

3476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAC

U12 Branch Point Sequence:

TTTGTTTTGTTT

Flanking Amino Acid:

NQSTMVTADMDNCSDLNSEL

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

77.5

32.9

Major BPS

65.7

0.39

1.2

67.4

36.7

Major PPT

80.6

0.69

0.9

73.5

41.9

Minor 5ss

28.5

-2.5

3.2

31.7

42.6

Minor BPS

42.5

-0.5

3.4

73.17

Associated Gene:

Gene:

MCC

Ensembl Gene ID:

ENSAPLG00000013663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024224

61147186 - 61245910

98725

ENSAPLT00000014280

61150623 - 61220512

69890

ENSAPLT00000046090

61147186 - 61298770

151585

ENSAPLT00000030257

61150623 - 61323860

173238

ENSAPLT00000029941

61150623 - 61342658

192036