Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_61373533_61373711_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61373533 - 61373711

Intron Length:

179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAA

U12 Branch Point Sequence:

TGTTCTTTAACT

Flanking Amino Acid:

LYNICHTSDSGAILIFLPGY

Intron Amino Acid Position:

628

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

88.9

24.9

Major BPS

74.7

0.61

65.9

40.9

Major PPT

83.8

0.76

0.7

79.9

25.5

Minor 5ss

39.5

-1.2

2.8

48.3

41.8

Minor BPS

88.8

1.3

0.9

96.8

27.8

Associated Gene:

Gene:

YTHDC2

Ensembl Gene ID:

ENSAPLG00000013814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027592

61357092 - 61383498

26407

ENSAPLT00000014411

61357092 - 61383498

26407