Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_61377061_61377535_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61377061 - 61377535

Intron Length:

475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTATTT

5'SS Class:

major

3'SS Sequence:

ATACTCTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

ATACTCTTTACA

Flanking Amino Acid:

DHMALLRAFQAWQKARSDGW

Intron Amino Acid Position:

911

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

76.1

33.6

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

79.6

0.67

0.9

72.9

36.6

Minor 5ss

50.2

0.01

2.8

73.9

42.5

Minor BPS

58.6

0.26

1.6

67.86

38.2

Associated Gene:

Gene:

YTHDC2

Ensembl Gene ID:

ENSAPLG00000013814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027592

61357092 - 61383498

26407

ENSAPLT00000014411

61357092 - 61383498

26407