Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_61382136_61382683_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61382136 - 61382683

Intron Length:

548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

AAATTCATTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

TAGTCTTTAACA

Flanking Amino Acid:

EWLHLKLDSEVACLLLQLRQ

Intron Amino Acid Position:

1124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.4

1.12

0.6

90.5

20.4

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

71.1

0.48

63.1

41.9

Minor 5ss

-1.6

2.7

44.9

43.2

Minor BPS

80.2

0.94

1.1

80.41

35.4

Associated Gene:

Gene:

YTHDC2

Ensembl Gene ID:

ENSAPLG00000013814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027592

61357092 - 61383498

26407

ENSAPLT00000014411

61357092 - 61383498

26407