Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_61465018_61503032_F

Intron Information:

Intron Rank:

150702

Intron Class:

major

Intron Phase:

Intron Coordinates:

61465018 - 61503032

Intron Length:

38015

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTTGAT

5'SS Class:

major

3'SS Sequence:

GCTTTGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTGTTGTGATCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

74.2

36.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

79.7

0.67

0.9

72.9

37.4

Minor 5ss

-1.9

3.5

48.8

47.4

Minor BPS

45.6

-0.3

2.3

63.38

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024178

61461151 - 61503097

41947