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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_61659114_61659392_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
61659114 - 61659392

Intron Length:
279

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAT|GTGAGCGGG

5'SS Class:
major

3'SS Sequence:
CCCCGCCCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GGCTCAC

U12 Branch Point Sequence:
CACGCCTTGCCC

Flanking Amino Acid:
MFRRRRRCDVMPVVLAG

Intron Amino Acid Position:
8

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.2
0.48
1.1
56.1
43.1

Major BPS
52.1
0.05
1.3
57
41.8

Major PPT
64.6
0.33
0.8
57
27.2

Minor 5ss
32.7
-2
3.4
42
45.2

Minor BPS
40.4
-0.7
3.4
53.86
44.6

Associated Gene:

Gene:
KCNN2

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

61659092 - 61732398
73307