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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_61707727_61724840_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
61707727 - 61724840

Intron Length:
17114

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTGAGTATT

5'SS Class:
strong_major

3'SS Sequence:
TTTTATTAAACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTATTAA

U12 Branch Point Sequence:
TTTTATTAAACA

Flanking Amino Acid:
KGVCLLTGIMVKNAAANVLR

Intron Amino Acid Position:
701

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.8
0.89
0.8
88.7
25.1

Major BPS
75.5
0.63
1
66.3
40.4

Major PPT
77.4
0.62
1
74.4
39.1

Minor 5ss
36.4
-1.5
3
48.3
41.8

Minor BPS
64.9
0.46
1.8
80.03
36.1

Associated Gene:

Gene:
KCNN2

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

61659092 - 61732398
73307