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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_61796845_61804950_R

Intron Information:

Intron Rank:
145732
Intron Class:
major
Intron Phase:
Intron Coordinates:
61796845 - 61804950
Intron Length:
8106

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTAACATGT
5'SS Class:
major
3'SS Sequence:
TTTCTTTGATTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
AACTTAT
U12 Branch Point Sequence:
TTTTCTTTGATT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
78
0.66
1.1
72.5
39.9
Major BPS
74.8
0.62
0.9
63.7
35.1
Major PPT
76
0.58
0.9
78.3
34.9
Minor 5ss
45.2
-0.5
3
65.7
45.3
Minor BPS
83.7
1.14
0.9
94.68
25

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000025802
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000039445
61796664 - 61818853
22190
ENSAPLT00000030354
61796664 - 61820253
23590
ENSAPLT00000023266
61796664 - 61820253
23590