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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_62374365_62379464_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62374365 - 62379464

Intron Length:

5100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTACAT

U12 Branch Point Sequence:

TGGCTCTGAAGT

Flanking Amino Acid:

KAIDYIRRSMSYDNGLAQGA

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.8

88.7

25.1

Major BPS

67.6

0.44

1.2

Major PPT

1.06

0.5

96.7

11.4

Minor 5ss

36.4

-1.5

48.3

41.8

Minor BPS

49.5

0.04

1.8

66.75

43.6

Associated Gene:

Gene:

PGGT1B

Ensembl Gene ID:

ENSAPLG00000012581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032288

62371527 - 62405106

33580

ENSAPLT00000013145

62371527 - 62404091

32565