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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_62379598_62382457_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62379598 - 62382457

Intron Length:

2860

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAAC

5'SS Class:

strong_major

3'SS Sequence:

ACCTTTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

AGATATGTAATG

Flanking Amino Acid:

GLRALQLEDGSFCAVLEGSE

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

77.5

30.5

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

83.4

0.75

0.8

80.7

30.6

Minor 5ss

33.1

-1.9

42.8

44.4

Minor BPS

44.1

-0.5

2.1

48.16

39.4

Associated Gene:

Gene:

PGGT1B

Ensembl Gene ID:

ENSAPLG00000012581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013145

62371527 - 62404091

32565

ENSAPLT00000032288

62371527 - 62405106

33580