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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_62382610_62389862_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62382610 - 62389862

Intron Length:

7253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

GATGTATCAATG

Flanking Amino Acid:

YLGMPFNPSKGPGISHPYDS

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

1.2

30.2

Major BPS

84.6

0.86

41.2

Major PPT

87.4

0.84

0.7

81.2

36.5

Minor 5ss

37.3

-1.4

2.8

49.7

46.6

Minor BPS

43.8

-0.6

1.8

46.41

40.4

Associated Gene:

Gene:

PGGT1B

Ensembl Gene ID:

ENSAPLG00000012581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013145

62371527 - 62404091

32565

ENSAPLT00000032288

62371527 - 62405106

33580