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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_6243413_6261616_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6243413 - 6261616

Intron Length:

18204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACGC

5'SS Class:

strong_major

3'SS Sequence:

TCGCCTCCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAA

U12 Branch Point Sequence:

TTTTCCTTTTTT

Flanking Amino Acid:

TNCLAPGGLSDSQVLQEPGD

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

69.9

41.1

Major BPS

77.9

0.69

0.8

77.9

25.8

Major PPT

72.6

0.51

0.8

30.9

Minor 5ss

32.3

-2

3.1

42.6

44.3

Minor BPS

48.5

-0

3.6

87.87

37.8

Associated Gene:

Gene:

SMAD7

Ensembl Gene ID:

ENSAPLG00000001268

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001256

6237022 - 6262155

25134