Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_62561819_62565427_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62561819 - 62565427

Intron Length:

3609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTCA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

GCCCAGTTAATT

Flanking Amino Acid:

LTANLIKLEKIQNNLQKLLE

Intron Amino Acid Position:

428

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.1

28.4

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

88.4

0.86

0.6

88.2

21.6

Minor 5ss

39.8

-1.1

2.8

50.7

45.7

Minor BPS

45.1

-0.2

2.2

58.74

44.5

Associated Gene:

Gene:

GRAMD2B

Ensembl Gene ID:

ENSAPLG00000013303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036636

62560911 - 62592396

31486

ENSAPLT00000026874

62561777 - 62602032

40256

ENSAPLT00000013901

62560911 - 62602032

41122