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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_62861479_62865299_F

Intron Information:

Intron Rank:

142753

Intron Class:

major

Intron Phase:

Intron Coordinates:

62861479 - 62865299

Intron Length:

3821

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

AGTTGCTTACAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

1.1

78.8

30.1

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

89.5

0.89

0.7

88.2

29.1

Minor 5ss

28.4

-2.5

2.9

32.1

42.4

Minor BPS

-0.3

2.2

55.8

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026969

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043270

62861341 - 62865574

4234

ENSAPLT00000028169

62861341 - 62869047

7707