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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_6310211_6331062_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6310211 - 6331062

Intron Length:

20852

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGCCTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

GCATACTGACCT

Flanking Amino Acid:

KLFRRRRNDRRRQQRLPGGN

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.6

32.8

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

81.2

0.7

0.8

73.2

37.2

Minor 5ss

30.6

-2.2

3.4

39.4

46.5

Minor BPS

47.3

-0.1

1.9

63.76

45.6

Associated Gene:

Gene:

CTIF

Ensembl Gene ID:

ENSAPLG00000014486

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048002

6281516 - 6398377

116862

ENSAPLT00000020569

6281516 - 6398377

116862

ENSAPLT00000015086

6281516 - 6398377

116862

ENSAPLT00000007009

6281516 - 6398377

116862