Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_63129769_63131215_F

Intron Information:

Intron Rank:

150372

Intron Class:

major

Intron Phase:

Intron Coordinates:

63129769 - 63131215

Intron Length:

1447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTCAG

5'SS Class:

major

3'SS Sequence:

ATACGGTTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TGTTGTTTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

64.9

42.8

Major BPS

0.52

1.1

77.7

35.3

Major PPT

62.2

0.27

58.3

42.3

Minor 5ss

26.7

-2.7

2.9

30.9

43.2

Minor BPS

70.4

0.64

1.7

79.83

36.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029787

63129489 - 63131316

1828