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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_63338644_63371727_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
63338644 - 63371727

Intron Length:
33084

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAGGACAA

5'SS Class:
strong_major

3'SS Sequence:
CTATTGTTTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATCTCAC

U12 Branch Point Sequence:
GTTATAGTAAGT

Flanking Amino Acid:
RRIKKLKTEKVDPLFTVPAP

Intron Amino Acid Position:
298

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.3
0.71
1
67.8
39.3

Major BPS
76.2
0.65
0.9
77.4
26.5

Major PPT
83
0.74
0.9
80.5
36.9

Minor 5ss
29.9
-2.3
3.3
38.1
46.8

Minor BPS
43
-0.4
2.4
66.11
44.2

Associated Gene:

Gene:
ZNF608

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

63335554 - 63416879
81326

63335554 - 63415205
79652

63337592 - 63458488
120897