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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_63371984_63405679_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
63371984 - 63405679

Intron Length:
33696

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAATTGT

5'SS Class:
strong_major

3'SS Sequence:
CTCCCACTGGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGATAAT

U12 Branch Point Sequence:
TTTTCTCCCACT

Flanking Amino Acid:
EGIVWHETEEGVLVVNVTWR

Intron Amino Acid Position:
383

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87
0.87
0.9
81.2
33.8

Major BPS
72.6
0.56
1.2
72.3
40.4

Major PPT
66.4
0.37
1
61.5
33.8

Minor 5ss
41.3
-1
3
58.7
45.8

Minor BPS
49.5
0.04
2.3
80.84
41

Associated Gene:

Gene:
ZNF608

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

63335554 - 63416879
81326

63335554 - 63415205
79652

63337592 - 63458488
120897