Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_63414088_63416866_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63414088 - 63416866

Intron Length:

2779

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTGGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTTTTTTAAAG

Flanking Amino Acid:

SATGMFPAQRRVNY*

Intron Amino Acid Position:

1505

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

78.6

35.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

89.2

0.88

0.8

88.3

28.9

Minor 5ss

35.4

-1.7

2.8

45.8

42.3

Minor BPS

66.7

0.39

1.4

68.86

38.5

Associated Gene:

Gene:

ZNF608

Ensembl Gene ID:

ENSAPLG00000016239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021658

63335554 - 63416879

81326