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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_6354387_6356867_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6354387 - 6356867

Intron Length:

2481

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTGCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GGTTTCTCATGC

Flanking Amino Acid:

KHPLPHIDREGLGKGKYEDG

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

80.5

33.9

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

75.2

0.57

0.8

72.7

Minor 5ss

32.5

-2

2.7

35.6

40.5

Minor BPS

45.1

-0.3

55.73

42.4

Associated Gene:

Gene:

CTIF

Ensembl Gene ID:

ENSAPLG00000014486

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020569

6281516 - 6398377

116862

ENSAPLT00000015086

6281516 - 6398377

116862

ENSAPLT00000007009

6281516 - 6398377

116862

ENSAPLT00000048002

6281516 - 6398377

116862