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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_6356973_6357681_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6356973 - 6357681

Intron Length:

709

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCTCCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

TTTTCCTCTCCT

Flanking Amino Acid:

IWAANTFDSFSGATWDLQPE

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

38.1

Major BPS

64.9

0.37

29.8

Major PPT

80.1

0.68

0.7

73.6

31.4

Minor 5ss

43.2

-0.7

2.9

56.2

47.9

Minor BPS

44.8

-0.3

3.7

84.68

41.8

Associated Gene:

Gene:

CTIF

Ensembl Gene ID:

ENSAPLG00000014486

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015086

6281516 - 6398377

116862

ENSAPLT00000007009

6281516 - 6398377

116862

ENSAPLT00000048002

6281516 - 6398377

116862

ENSAPLT00000020569

6281516 - 6398377

116862