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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_6372179_6375492_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6372179 - 6375492

Intron Length:

3314

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGGG

5'SS Class:

major

3'SS Sequence:

ATCCCTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

TATTATTTTACA

Flanking Amino Acid:

SEKTQSNISQWTADCSEQLD

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

63.1

43.4

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

0.72

0.8

75.8

32.1

Minor 5ss

25.2

-2.8

3.2

43.1

Minor BPS

59.8

0.3

1.8

73.39

38.3

Associated Gene:

Gene:

CTIF

Ensembl Gene ID:

ENSAPLG00000014486

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048002

6281516 - 6398377

116862

ENSAPLT00000007009

6281516 - 6398377

116862