Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_63726192_63728915_F

Intron Information:

Intron Rank:

137013

Intron Class:

major

Intron Phase:

Intron Coordinates:

63726192 - 63728915

Intron Length:

2724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACTTC

5'SS Class:

strong_major

3'SS Sequence:

TCCATCTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CATTTCCCATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.6

35.3

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

82.8

0.74

0.8

80.1

31.7

Minor 5ss

47.8

-0.2

2.9

67.4

Minor BPS

45.3

-0.2

2.1

65.78

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031087

63719708 - 63729355

9648