Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_63726192_63731055_F

Intron Information:

Intron Rank:

137018

Intron Class:

major

Intron Phase:

Intron Coordinates:

63726192 - 63731055

Intron Length:

4864

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTAATTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.6

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

93.5

0.98

0.7

92.4

26.2

Minor 5ss

47.8

-0.2

2.9

67.4

Minor BPS

70.3

0.72

1.2

80.87

34.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040636

63720653 - 63731243

10591