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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_6375706_6398146_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6375706 - 6398146

Intron Length:

22441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGCCC

5'SS Class:

major

3'SS Sequence:

TTTCCCTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

GAGGACTCAATT

Flanking Amino Acid:

APPAPSAEPTAPPVPAVPAA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

62.2

41.1

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

84.2

0.77

0.7

76.8

31.8

Minor 5ss

32.5

-2

3.3

44.2

43.2

Minor BPS

46.8

-0.1

1.8

59.3

43.8

Associated Gene:

Gene:

CTIF

Ensembl Gene ID:

ENSAPLG00000014486

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048002

6281516 - 6398377

116862

ENSAPLT00000020569

6281516 - 6398377

116862

ENSAPLT00000015086

6281516 - 6398377

116862

ENSAPLT00000007009

6281516 - 6398377

116862