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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_63878464_63882895_R


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
63878464 - 63882895

Intron Length:
4432

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GTG|GTGAGTTCT

5'SS Class:
strong_major

3'SS Sequence:
TTTCTACTGAAAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CAATAAC

U12 Branch Point Sequence:
TCTCCCTCAATA

Flanking Amino Acid:
ETNCEKVLNMCYITFRAALV

Intron Amino Acid Position:
438

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.1
0.83
0.8
79.3
29.7

Major BPS
57.8
0.19
1.1
59.6
32.6

Major PPT
65.7
0.35
1.2
68
37

Minor 5ss
37.5
-1.4
2.9
47.5
42.3

Minor BPS
66
0.5
1.5
73.19
38.8

Associated Gene:

Gene:
CSNK1G3

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

63878371 - 63937474
59104