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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_63878464_63883293_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
63878464 - 63883293

Intron Length:
4830

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTATGTTCT

5'SS Class:
major

3'SS Sequence:
TTTCTACTGAAAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CAATAAC

U12 Branch Point Sequence:
TCTCCCTCAATA

Flanking Amino Acid:
PAEVEVTDETNYITFRAALV

Intron Amino Acid Position:
430

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79
0.68
1
76.9
32.4

Major BPS
57.8
0.19
1.1
59.6
32.6

Major PPT
65.7
0.35
1.2
68
37

Minor 5ss
52.3
0.08
2.3
68
36.6

Minor BPS
66
0.5
1.5
73.19
38.8

Associated Gene:

Gene:
CSNK1G3

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

63878371 - 63937474
59104