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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_64001733_64010347_F


Intron Information:

Intron Rank:
19

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
64001733 - 64010347

Intron Length:
8615

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATACATG

5'SS Class:
major

3'SS Sequence:
TTTCACCCATAAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TATCCTTTCACC

Flanking Amino Acid:
ALKELARLKQREQESAMARL

Intron Amino Acid Position:
812

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.2
0.55
1
67.7
43.2

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
62.2
0.27
1.1
66.4
34.4

Minor 5ss
48.4
-0.1
2.7
65.5
45.8

Minor BPS
62.5
0.38
1.7
72.96
37.9

Associated Gene:

Gene:
CEP120

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

63970939 - 64011383
40445

63970939 - 64011383
40445

63973442 - 64011383
37942