Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_64010494_64011142_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64010494 - 64011142

Intron Length:

649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTAAAA

5'SS Class:

major

3'SS Sequence:

TTATTAATGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

ATTTTATTAATG

Flanking Amino Acid:

ELEDIRNELNRLKQQEEERK

Intron Amino Acid Position:

860

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

71.5

33.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

70.2

0.46

1.1

63.7

Minor 5ss

38.9

-1.2

2.8

48.9

46.9

Minor BPS

65.5

0.35

1.6

70.57

36.6

Associated Gene:

Gene:

CEP120

Ensembl Gene ID:

ENSAPLG00000001549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042036

63973442 - 64011383

37942

ENSAPLT00000019109

63970939 - 64011383

40445

ENSAPLT00000001877

63970939 - 64011383

40445