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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_64270178_64272842_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64270178 - 64272842

Intron Length:

2665

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTGCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

ATTTCTGCATGT

Flanking Amino Acid:

LQQAKDEIKEWETKVQQGEK

Intron Amino Acid Position:

525

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

78.1

32.2

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

81.6

0.71

0.9

76.7

37.4

Minor 5ss

39.7

-1.2

3.4

55.3

48.9

Minor BPS

41.4

-0.5

2.4

65.98

Associated Gene:

Gene:

SNX2

Ensembl Gene ID:

ENSAPLG00000015741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044070

64269145 - 64304540

35396

ENSAPLT00000016474

64264215 - 64303384

39170