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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_64272363_64272842_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

64272363 - 64272842

Intron Length:

480

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGTTA

5'SS Class:

strong_major

3'SS Sequence:

ATGCTTCACTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATACAC

U12 Branch Point Sequence:

TCATGCTTCACT

Flanking Amino Acid:

LQQAKDEIKEEIEEWETKVQ

Intron Amino Acid Position:

550

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

78.1

32.2

Major BPS

0.37

31.6

Major PPT

57.5

0.17

1.1

61.3

38.9

Minor 5ss

39.7

-1.2

3.4

55.3

48.9

Minor BPS

55.8

0.26

2.2

76.34

46.1

Associated Gene:

Gene:

SNX2

Ensembl Gene ID:

ENSAPLG00000015741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041192

64269145 - 64304540

35396