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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_64274033_64275789_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64274033 - 64275789

Intron Length:

1757

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTATATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTATAT

U12 Branch Point Sequence:

ACTTCTATATTT

Flanking Amino Acid:

SVEALVCHRKELSANTAAFA

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

80.7

34.7

Major BPS

66.7

0.41

1.1

63.2

42.8

Major PPT

0.77

0.8

81.6

34.4

Minor 5ss

43.9

-0.7

2.8

58.4

46.2

Minor BPS

50.7

0.1

1.8

70.74

40.9

Associated Gene:

Gene:

SNX2

Ensembl Gene ID:

ENSAPLG00000015741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044070

64269145 - 64304540

35396

ENSAPLT00000041192

64269145 - 64304540

35396

ENSAPLT00000016474

64264215 - 64303384

39170