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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_64277583_64280758_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64277583 - 64280758

Intron Length:

3176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATATAT

5'SS Class:

strong_major

3'SS Sequence:

TTTAAAATCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AATATTTTAATT

Flanking Amino Acid:

FVEKRRAALERYLQRTVKHP

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

79.6

29.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

66.3

0.37

59.4

40.4

Minor 5ss

39.7

-1.2

3.1

56.3

47.9

Minor BPS

66.6

0.6

1.2

75.73

34.9

Associated Gene:

Gene:

SNX2

Ensembl Gene ID:

ENSAPLG00000015741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044070

64269145 - 64304540

35396

ENSAPLT00000041192

64269145 - 64304540

35396

ENSAPLT00000016474

64264215 - 64303384

39170