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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_64286495_64303060_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64286495 - 64303060

Intron Length:

16566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

AATCTTTACCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

AAATCTTTACCT

Flanking Amino Acid:

ALRQHRVHHGEATEEVSLDS

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

66.4

0.37

0.9

59.2

41.2

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

64.6

0.54

1.6

76.44

39.9

Associated Gene:

Gene:

SNX2

Ensembl Gene ID:

ENSAPLG00000015741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044070

64269145 - 64304540

35396

ENSAPLT00000041192

64269145 - 64304540

35396