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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_64296096_64303060_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64296096 - 64303060

Intron Length:

6965

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTAACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

CTTTTTTTAACA

Flanking Amino Acid:

LFASTVSTMESSPSSPEPAS

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

76.9

0.67

66.3

40.4

Major PPT

0.83

0.8

84.4

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

79.3

0.92

1.1

82.25

33.1

Associated Gene:

Gene:

SNX2

Ensembl Gene ID:

ENSAPLG00000015741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016474

64264215 - 64303384

39170