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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_64415109_64417636_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64415109 - 64417636

Intron Length:

2528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTGA

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTTAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TTTTTCTTTAAG

Flanking Amino Acid:

SEGKSLPMSSSSPSSPASGK

Intron Amino Acid Position:

559

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

68.5

38.9

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

85.8

0.8

0.9

91.3

Minor 5ss

36.2

-1.6

3.2

47.7

Minor BPS

62.2

0.24

1.8

72.26

40.2

Associated Gene:

Gene:

SNCAIP

Ensembl Gene ID:

ENSAPLG00000015309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030101

64413636 - 64495633

81998

ENSAPLT00000015978

64406735 - 64495633

88899

ENSAPLT00000040701

64413316 - 64460665

47350

ENSAPLT00000031271

64406584 - 64495633

89050

ENSAPLT00000030191

64411682 - 64495633

83952