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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_64433483_64435995_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64433483 - 64435995

Intron Length:

2513

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTAG

5'SS Class:

strong_major

3'SS Sequence:

GTTGTTTGTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

ATTTAAATAATT

Flanking Amino Acid:

QLTPAGLAIKNGQLECVRWM

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

76.8

34.6

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

74.7

0.56

73.5

41.9

Minor 5ss

39.6

-1.2

2.8

49.3

46.9

Minor BPS

51.5

0.13

78.11

37.5

Associated Gene:

Gene:

SNCAIP

Ensembl Gene ID:

ENSAPLG00000015309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031271

64406584 - 64495633

89050

ENSAPLT00000030191

64411682 - 64495633

83952

ENSAPLT00000030101

64413636 - 64495633

81998

ENSAPLT00000015978

64406735 - 64495633

88899

ENSAPLT00000040701

64413316 - 64460665

47350