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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_64586058_64586289_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64586058 - 64586289

Intron Length:

232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TGATGAACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

GTTTGATGAACT

Flanking Amino Acid:

PGYGTGYFQYGLPDLVPDPY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

67.3

36.7

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

64.9

0.34

56.4

43.4

Minor 5ss

32.2

-2

3.4

43.3

Minor BPS

53.2

0.18

2.1

79.31

42.1

Associated Gene:

Gene:

LOX

Ensembl Gene ID:

ENSAPLG00000003826

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003924

64585790 - 64593841

8052