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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_64590272_64593466_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64590272 - 64593466

Intron Length:

3195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTATTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TAACTCTTATTT

Flanking Amino Acid:

RRYACTAHTQGLSPGCYDTY

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.5

1.02

0.7

25.3

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

76.7

0.6

75.2

38.5

Minor 5ss

36.4

-1.5

3.6

55.7

48.5

Minor BPS

57.3

0.31

1.6

71.26

39.6

Associated Gene:

Gene:

LOX

Ensembl Gene ID:

ENSAPLG00000003826

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003924

64585790 - 64593841

8052