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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_6488835_6540980_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6488835 - 6540980

Intron Length:

52146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

CCGTGCTGATGC

Flanking Amino Acid:

ARDLTRKRGYRALDENMANG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

78.2

37.9

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

76.1

0.59

0.9

69.4

41.7

Minor 5ss

34.4

-1.8

2.8

43.3

43.8

Minor BPS

38.2

-0.9

2.2

42.05

Associated Gene:

Gene:

ZBTB7C

Ensembl Gene ID:

ENSAPLG00000016660

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038222

6473391 - 6548954

75564

ENSAPLT00000035900

6477557 - 6548413

70857