Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_65321662_65323393_R

Intron Information:

Intron Rank:

149536

Intron Class:

major

Intron Phase:

Intron Coordinates:

65321662 - 65323393

Intron Length:

1732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGGGTGGG

5'SS Class:

major

3'SS Sequence:

TCTATCCATTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TCAACGTGAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

54.4

44.7

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

0.61

0.9

74.3

35.4

Minor 5ss

25.7

-2.8

3.2

30.9

43.1

Minor BPS

44.3

-0.4

2.2

55.41

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044932

65320284 - 65323622

3339