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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_65577030_65578807_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65577030 - 65578807

Intron Length:

1778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTGAA

U12 Branch Point Sequence:

TGCAGTTGAATA

Flanking Amino Acid:

VVQQKTNPQKAFFSGKLKVK

Intron Amino Acid Position:

709

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

75.7

34.4

Major BPS

63.2

0.33

1.1

55.1

42.1

Major PPT

84.3

0.77

0.7

80.8

31.2

Minor 5ss

30.4

-2.2

3.5

42.4

45.1

Minor BPS

45.4

-0.3

1.8

53.22

39.5

Associated Gene:

Gene:

HSD17B4

Ensembl Gene ID:

ENSAPLG00000009938

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010437

65576685 - 65637198

60514