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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_65588300_65589696_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65588300 - 65589696

Intron Length:

1397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGAATG

5'SS Class:

major

3'SS Sequence:

TCCCCTATCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TTTCCCCTATCA

Flanking Amino Acid:

EGDRIHFQTKVKETGDIAIA

Intron Amino Acid Position:

590

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.3

75.5

40.6

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

0.54

0.8

30.6

Minor 5ss

32.5

-2

2.9

40.4

45.3

Minor BPS

59.8

0.3

78.04

38.2

Associated Gene:

Gene:

HSD17B4

Ensembl Gene ID:

ENSAPLG00000009938

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010437

65576685 - 65637198

60514