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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_65589784_65590056_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65589784 - 65590056

Intron Length:

273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGTGGC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAG

U12 Branch Point Sequence:

TTTTTTTTTAAG

Flanking Amino Acid:

NDVTRFKAIKVRFAKPVIPG

Intron Amino Acid Position:

561

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.3

63.6

42.3

Major BPS

75.6

0.64

1.5

34.5

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

34.5

-1.8

44.4

43.5

Minor BPS

56.3

0.05

1.8

67.7

39.9

Associated Gene:

Gene:

HSD17B4

Ensembl Gene ID:

ENSAPLG00000009938

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010437

65576685 - 65637198

60514