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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_65592958_65603739_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65592958 - 65603739

Intron Length:

10782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTCG

5'SS Class:

major

3'SS Sequence:

TTTGTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTACAA

U12 Branch Point Sequence:

CTAGCTATACTC

Flanking Amino Acid:

ILSDVTTADQAALYRLSGDW

Intron Amino Acid Position:

502

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

66.4

39.9

Major BPS

0.27

1.1

69.2

36.3

Major PPT

89.5

0.89

0.7

29.8

Minor 5ss

36.4

-1.5

3.3

47.6

Minor BPS

43.6

-0.5

1.9

51.12

40.7

Associated Gene:

Gene:

HSD17B4

Ensembl Gene ID:

ENSAPLG00000009938

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010437

65576685 - 65637198

60514