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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_65610816_65611293_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65610816 - 65611293

Intron Length:

478

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCTACATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

CTGTCTCTACAT

Flanking Amino Acid:

LPGLNIDLAKMLHGEQYLEL

Intron Amino Acid Position:

404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

69.7

42.4

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

70.1

0.45

0.9

65.6

35.2

Minor 5ss

30.5

-2.2

3.3

38.8

46.5

Minor BPS

46.3

-0.2

65.27

45.4

Associated Gene:

Gene:

HSD17B4

Ensembl Gene ID:

ENSAPLG00000009938

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010437

65576685 - 65637198

60514